ukncc
  Identification: organisms type and groups; methods used  
 

The UKNCC offer identification by a range of techniques for many organisms including, actinomycetes, algae, animal cells, arthropods, bacteria, cyanobacteria, filamentous fungi, nematodes, protozoa, mycoplasma and yeasts. The collections that provide the services and methods used are listed under the different organisms below.

A number of links to sites dealing with taxononmy and nomenclature and literature references to keys for organism identification are also listed.

Identification Services

Actinomycetes

NCPF
Method used:
Morphological and molecular fingerprinting
Groups covered: Medical

NCIMB
Method used:
Morphological, biochemical, MIDI and molecular fingerprinting
Groups covered: Industrial, Food and Environmental
Conditions of acceptance

Algae

CCAP (freshwater)
Methods used: morphological and biochemical
Groups covered:
Freshwater

CCAP(marine)
Method used: morphological
Groups covered:
Marine

Animal cell lines

ECACC
Methods used:
molecular fingerprinting

Bacteria

CABI
Methods used: MIDI, biochemical and molecular fingerprinting Groups covered: Phytopathogenic

NCIMB
Methods used: Physiological, morphological, biochemical (including MIDI/BIOLOG), and molecular fingerprinting
Groups covered:
Industrial, Food and Environmental
Conditions of Acceptance

NCPPB

Methods used: MIDI, biochemical and molecular fingerprinting
Groups covered:
Phytopathogenic

NCTC
Methods used: MIDI, biochemical and molecular fingerprinting
Groups covered:
Medical

Cyanobacteria

CCAP (freshwater)
Methods used:
morphological and biochemical

Filamentous fungi

CABI
Methods used:
morphological, biochemical and molecular fingerprinting
Groups covered:
Ascomycetes, Dematiaceous hyphomycetes, Mitotic fungi, Coelomycetes, lichenized fungi, Zygomycetes
Specialists:

  • D. Brayford - Nectria and anamorphs: Acremonium, Cylindrocarpon, Fusarium, Myrothecium & Volutella. Oomycota: Phytophthora
  • P. F. Cannon - Coelomycetes: Colletotrichum, Cytospora & Phomopsis. Ascomycetes: Amphisphaeriales, Diaporthales, Eurotiales (those not covered by Lawrence), Phyllachorales, Sordariales and Xylariales
  • J.C. David - Mycosphaerellaceae and anamorphs: Cercospora and related genera, Cladosporium and related genera. Alternaria and related genera. Erysiphales. Lichenized fungi
  • G. Kinsey - Coelomycetes (excluding those covered by Cannon). Ascomycetes: Dothideales (except Mycosphaerellaceae) & Pezizales (except Tuberaceae). Myxomycota
  • P.M. Kirk - Dematiaceous hyphomycetes (except those covered by David & Minter). Ascomycetes: Microthyriaceae. Zygomycetes. Basidiomycota (Uredinales, Ustilaginales and the macrobasidiomycetes)
  • Z. Lawrence - Aspergillus, Penicillium & Paecilomyces and eurotialean teleomorphs
  • D.W. Minter - Hyaline hyphomycetes (except those covered by Brayford). Black yeasts. Ascomycetes: Diatrypales, Ophiostomatales, Rhytismatales & Tuberaceae

NCWRF
Methods used: morphological
Groups covered:
wood rotting basidiomycetes

Insects

CABI
Method used:
morphological
Groups covered:
Arthropods
Specialists:
  • R. Booth - Coleoptera
  • J. LaSalle - parasitic hymenoptera (superfamily Chalcidoidea)
  • A. Polaszek - parasitic hymenoptera (superfamily Chalcidoidea)
  • G.Watson - Homoptera, Coccoidea

Nematodes

CABI
Methods used:
morphological and molecular fingerprinting
Specialists:

  • D. Hunt
  • A. Reid - entomopathogenic nematodes

Protozoa

CCAP(freshwater)
Methods used:
morphological and biochemical

Mycoplasma

ECACC
Method used:
morphological
NCTC

Method used:
morphological

Yeasts

CABI
Methods used:
MIDI and biochemical
Groups covered:
All
Specialists:

NCPF
Methods used:
morphological and molecular fingerprinting
Groups covered:
Medically important
NCYC
Methods used:
morphological, biochemical and molecular fingerprinting
Groups covered: All

Summary

Organism

Technique

 

Morphological

MIDI

BIOLOG

Biochemical

Molecular fingerprinting and sequencing

Actinomycetes

NCPF;NCIMB

NCIMB

 

NCIMB

NCIMB; NCPF

Algae

CCAP

   

CCAP(marine)

 

Animal cell lines

       

ECACC

Bacteria

NCIMB

CABI; NCIMB; NCPPB; NCTC

NCIMB

CABI; NCIMB; NCPPB NCTC

NCIMB

Cyanobacteria

CCAP

   

CCAP

 

Filamentous fungi

CABI; NCPF

   

CABI

CABI; NCPF

Insects

CABI

       

Nematodes

CABI

     

CABI

Protozoa

CCAP(freshwater)

     

CCAP(freshwater)

Mycoplasma

NCTC; ECACC

       

Yeasts

NCYC: NCPF

CABI

 

CABI; NCYC

NCYC; NCPF

UKNCC offers identification services across a range of organisms of biotechnological, agricultural and medical importance.Wide ranging expertise is available at these centres and you can benefit from their considerable experience.